SPM Instructions
MySplitMosaic.m (matLab scripts) - Modified by Eman
Ghobrial
ZeroPad.m
this program was tested on Unix and PC, could be modified to add other platforms
this script reads a Siemens .ima file and writes a .img and .hdr file (SPM/Analyze format) -
usage:
1. Copy the two attached programs to your SPM directory:
2. run the MySplitMosaic script.
Example of the input:
MySplitMosaic
siemens mosaic path: /data/spm>
output path: /data/spm/analyze>
patient no: <1904>
First series no: <3>
Last series no: <7>
number of slices: <16>
P.S. for Quench users spm and the two scripts are installed just create a startup file and add the spm folder to your path.
addpath /apps/spm/spm99
ZeroPad.m
this program was tested on Unix and PC, could be modified to add other platforms
this script reads a Siemens .ima file and writes a .img and .hdr file (SPM/Analyze format) -
usage:
1. Copy the two attached programs to your SPM directory:
2. run the MySplitMosaic script.
Example of the input:
MySplitMosaic
siemens mosaic path: /data/spm>
output path: /data/spm/analyze>
patient no: <1904>
First series no: <3>
Last series no: <7>
number of slices: <16>
P.S. for Quench users spm and the two scripts are installed just create a startup file and add the spm folder to your path.
addpath /apps/spm/spm99